Search for: All records

Abstract The mesoscale spectrum describes the distribution of kinetic energy in the Earth's atmosphere between length scales of 10 and 400 km. Since the first observations, the origins of this spectrum have been controversial. At synoptic scales, the spectrum follows a −3 spectral slope, consistent with two‐dimensional turbulence theory, but a shallower −5/3 slope was observed at the shorter mesoscales. The cause of the shallower slope remains obscure, illustrating our lack of understanding. Through a novel coarse‐graining methodology, we are able to present a spatio‐temporal climatology of the spectral slope. We find convection and orography have a shallowing effect and can quantify this using “conditioned spectra.” These are typical spectra for a meteorological condition, obtained by aggregating spectra where the condition holds. This allows the investigation of new relationships, such as that between energy flux and spectral slope. Potential future applications of our methodology include predictability research and model validation. 

The cicada fauna of Western Australia is briefly reviewed. Six genera and 14 species are recorded from the State for the first time bringing the total of known species and subspecies to 105 and a list of all 105 is provided. Among the taxa here recorded are five new genera and 13 new species belonging to the tribes Macrotristriini (Illyria viridis sp. n.), Pictilini (Chrysocicada trophis sp. n.), and Cicadettini (Calipsalta gen. n., Calipsalta brunnea sp. n., C. fumosa sp. n., C. viridans sp. n., Kalarko gen. n., Kalarko ferruginosus sp. n., Ewartia adusta sp. n., Parvopsalta gen. n., Parvopsalta victoriae sp. n., Pedana gen. n., Pedana hesperia sp. n., Pegapsaltria gen. n., Pegapsaltria lutea sp. n., Pyropsalta amnica sp. n., Py. patula sp. n., and Py. rhythmica sp. n). In addition, Erempsalta hermannsburgensis (Distant, 1907) is redescribed and its presence in Western Australia (and four other States) documented for the first time. Songs are analysed for all species except two species of Pyropsalta where recordings were unavailable. 

This paper provides a revised faunal checklist for the subfamilies, tribes, subtribes, genera and species of the family Cicadidae (Insecta: Hemiptera) from Mindanao, Philippines, comprising 31 species belong- ing to 19 genera. A new genus, Neopurana Lee and Marshall gen. nov., and nine new species, Platypleura bella Lee and A. Mohagan sp. nov., Platypleura minima Lee and Marshall sp. nov., Chremistica flavialata Lee and Marshall sp. nov., Oncotympana obesa Lee and Marshall sp. nov., Neopurana bouptera Lee and Marshall sp. nov., Purana mindanaoensis Lee and Marshall sp. nov., Mogannia tenebrosa Lee and Marshall sp. nov., Philipsalta exilis Lee and Marshall sp. nov. and Philipsalta lata Lee and Marshall sp. nov., are described. Platypleura transitiva Lee, 2021 is newly added to the list of cicadas from Mindanao. Male calling songs are illustrated and described for all new species. Information on the geographic distributions of the 31 Mindanao species is provided. 

Micro-computed tomography (µCT) is a valuable tool for visualizing microstructures and damage in fiber-reinforced composites. However, the large sets of data generated by µCT present a barrier to extracting quantitative information. Deep learning models have shown promise for overcoming this barrier by enabling automated segmentation of features of interest from the images. However, robust validation methods have not yet been used to quantify the success rate of the models and the ability to extract accurate measurements from the segmented image. In this paper, we evaluate the detection rate for segmenting fibers in low-contrast CT images using a deep learning model with three different approaches for defining the reference (ground-truth) image. The feasibility of measuring sub-pixel feature dimensions from the µCT image, in certain cases where the µCT image intensity is dependent on the feature dimensions, is assessed and calibrated using a higher-resolution image from a polished cross-section of the test specimen in the same location as the µCT image. 

Abstract Historically, most North American periodical cicada (Hemiptera: Cicadidae: Magicicada spp. Davis 1925) distribution records have been mapped at county-level resolution. In recent decades, Magicicada brood distributions and especially edges have been mapped at a higher resolution, aided by the use of GIS technology after 2000. Brood VI of the 17-yr cicadas emerged in 2000 and 2017 and is the first for which detailed mapping has been completed in consecutive generations. Overlaying the records from the two generations suggests that in some places, Brood VI expanded its range slightly between 2000 and 2017, although the measured changes are close to the lower limit of detectability given the methods used. Even so, no simple alternative to range expansion easily accounts for these observations. We also bolster Alexander and Moore’s assertion that M. cassini does not occur in Brood VI. 

Why do some genera radiate, whereas others do not? The genetic structure of present-day populations can provide clues for developing hypotheses. In New Zealand, three Cicadidae genera are depauperate [Amphipsalta (three species), Notopsalta (one species) and Rhodopsalta (three species)], whereas two have speciated extensively [Kikihia (~30 species/subspecies) and Maoricicada (~20 species/subspecies). Here, we examine the evolution of Rhodopsalta, the last New Zealand genus to be studied phylogenetically and phylogeographically. We use Bayesian and maximum-likelihood analyses of mitochondrial cox1 and nuclear EF1α gene sequences. Concatenated and single-gene phylogenies for 70 specimens (58 localities) support its monophyly and three described species: Rhodopsalta cruentata, Rhodopsalta leptomera and Rhodopsalta microdora, the last taxon previously regarded as uncertain. We provide distribution maps, biological notes and the first descriptions of diagnostic songs. We show that both R. cruentata and R. microdora exhibit northern and southern genetic subclades. Subclades of the dry-adapted R. microdora clade show geographical structure, whereas those of the mesic R. cruentata and sand-dune specialist R. leptomera have few discernible patterns. Genetic, bioacoustical and detailed distributional evidence for R. microdora add to the known biodiversity of New Zealand. We designate a lectotype for Tettigonia cruentataFabricius, 1775, the type species of Rhodopsalta. 

Abstract Contamination of a genetic sample with DNA from one or more nontarget species is a continuing concern of molecular phylogenetic studies, both Sanger sequencing studies and next-generation sequencing studies. We developed an automated pipeline for identifying and excluding likely cross-contaminated loci based on the detection of bimodal distributions of patristic distances across gene trees. When contamination occurs between samples within a data set, a comparison between a contaminated sample and its contaminant taxon will yield bimodal distributions with one peak close to zero patristic distance. This new method does not rely on a priori knowledge of taxon relatedness nor does it determine the causes(s) of the contamination. Exclusion of putatively contaminated loci from a data set generated for the insect family Cicadidae showed that these sequences were affecting some topological patterns and branch supports, although the effects were sometimes subtle, with some contamination-influenced relationships exhibiting strong bootstrap support. Long tip branches and outlier values for one anchored phylogenomic pipeline statistic (AvgNHomologs) were correlated with the presence of contamination. While the anchored hybrid enrichment markers used here, which target hemipteroid taxa, proved effective in resolving deep and shallow level Cicadidae relationships in aggregate, individual markers contained inadequate phylogenetic signal, in part probably due to short length. The cleaned data set, consisting of 429 loci, from 90 genera representing 44 of 56 current Cicadidae tribes, supported three of the four sampled Cicadidae subfamilies in concatenated-matrix maximum likelihood (ML) and multispecies coalescent-based species tree analyses, with the fourth subfamily weakly supported in the ML trees. No well-supported patterns from previous family-level Sanger sequencing studies of Cicadidae phylogeny were contradicted. One taxon (Aragualna plenalinea) did not fall with its current subfamily in the genetic tree, and this genus and its tribe Aragualnini is reclassified to Tibicininae following morphological re-examination. Only subtle differences were observed in trees after the removal of loci for which divergent base frequencies were detected. Greater success may be achieved by increased taxon sampling and developing a probe set targeting a more recent common ancestor and longer loci. Searches for contamination are an essential step in phylogenomic analyses of all kinds and our pipeline is an effective solution. [Auchenorrhyncha; base-composition bias; Cicadidae; Cicadoidea; Hemiptera; phylogenetic conflict.]